It might not sure as this is one of the few things i haven't tried when editing rels :/
So you could try that and see what happens or you could just name the stage to go over all slots
It's up to you really
I'll try it over all five slots first, then I'll delete 00 and 01 and 03 and 04 and leave STGVILLAGE_02.PAC (as we all know it's not the afternoon at 1:30 AM) and see if it works.
Edit: Five slot works, but the game freezes if I remove the night slot ones (STGVILLAGE_03.PAC and STGVILLAGE_04.PAC). So I guess I do need 00-04.