why arent a lot of my stage textures working?

[nesjake]

I'm using brawlbox and photoshop... I edited my source files and then changed the mode to indexed so not to exceed 240 colors... and since the files didn't had transparency I clicked that off.
Here is the file I'm working on if anyone can help:
http://www.megaupload.com/?d=DBKBNJ7E